Neutrophils Infected with Highly Virulent Influenza H3N2 Virus Exhibit Augmented Early Cell Death and Rapid Induction of Type I Interferon Signaling Pathways." Ivana, Fransiskus X., K.S. Tan, M.C. Phoon, Bevin P. Engelward, Roy E. Welsch, Jagath C. Rajapakse and Vincent T. Chow. Genomics Vol. 101, No. 2 (2013): 101-112.
Differential Pulmonary Transcriptomic Profiles in Murine Lungs Infected with Low and Highly Virulent Influenza H3N2 Viruses Reveal Dysregulation of TERM1 Signaling, Cytokines, and Chemokines." Ivan, Fransiskus X., Jagath C. Rajapakse, Roy E. Welsch, Steve G. Rozen, T. Narasaraju, Gordon M. Xiong, Bevin P. Engelward and Vincent T. Chow. Functional and Integrative Genomics Vol. 12, No. 1 (2012): 105-117.
MCAM: Multiple Clustering Analysis Methodology for Deriving Hypotheses and Insights From High-Throughput Proteomic Datasets." Naegle, Kristen M., Roy E. Welsch, Michael B. Yaffe, Forest M. White and Douglas A. Lauffenburger. PLoS Computational Biolog Vol. 7, No. 7 (2011): 1-15.
Correlation of Cell Membrane Dynamics and Cell Motility." Veronika, Merlin, Roy E. Welsch, P. Matsudaira and J. Rajapakse. BMC Bioinformatics Vol. 12, No. Suppl. 13 (2011): S19.
Predicting in vivo Anti-Heptatofribrotic Drug Efficacy Based on in vitro High-Content Analysis." Zheng, Baixue, Looling Tan , Xuejun Mo , Weimiao Yu , Yan Wang , Lisa Tucker-Kellogg , Roy E. Welsch , Peter T. C. So and Hanry Yu. PLoS ONE Vol. 6, No. 11 (2011): e26230.
Towards Surface Quantification of Liver Fibrosis Progression." He, Yuting, Chiang Huen Kang, Shuoyu Xu, Xiaoye Tuo, Scott Trasti, Dean C S Tai, Anju Mythreyi Raja, Qiwen Peng, Peter T C So, Jagath C Rajapakse, Roy E. Welsch and Hanry Yu. Journal of Biomedical Optics Vol. 15, No. 5 (2010): 1-11.
A Cell Profiling Framework for Modeling Drug Responses from HCS Imaging." Ng, Alvin Y. J., Jagath C. Rajapakse, Roy E. Welsch, Paul T. Matsudaira, Victor Horodincu and James G. Evans. Journal of Biomolecular Screening Vol. 15, No. 7 (2010): 858-868.
A Diagnostic Method for Simultaneous Feature Selection and Outlier Identification in Linear Regression." Menjoge, Rajiv and Roy E. Welsch. Computational Statistics and Data Analysis Vol. 54, No. 12 (2010): 3181-3193.
Outlier Detection and Robust Covariance Estimation Using Mathematical Programming." Nguyen, Tri-Dzung and Roy E. Welsch. Advances in Data Analysis and Classification Vol. 4, No. 4 (2010): 301-334.
PTMSCOUT: A Web Resource for Analysis of High-throughput Post-translational Proteomic Studies." Naegle, Kristen M., Melissa Gymrek, Brian A. Joughin, Joel P. Wagner, Roy E. Welsch, Michael B. Yaffe, Douglas A. Lauffenburger and Forest M. White. Molecular and Cellular Proteomics Vol. 9, No. 11 (2010): 2558-2570.
